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Edu-talk

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Edu-talk

  • 제목

    [Proteomics] 논문-Standard 없이 Edman sequencing을 활용한 단백질의 정량에 대한 방법
  • 작성자

    이매스
  • 첨부파일

해당 논문 자료는 Edman sequencing 에 의하여 protein 에 대한 standard 없이도 단백질의 정량에 대한 방법을 시도하여 결과를 보고한 논문입니다.

Title

Can Edman degradation be used for quantification? Isotope-dilution liquid chromatography-electrospray ionization tandem mass spectrometry and the long-term stability of 20 phenylthiohydantoin-amino acids.


Abstract

Edman degradation is a well-known method for obtaining amino acid (AA) sequences from a peptide by means of sequential reactions that release the N-terminal AAs from the peptide as a phenylthiohydantoin (PTH) derivative. Because of unexpected loss during the reaction and handling, there are few reports of use of this reaction for quantification. This manuscript describes the development of isotope-dilution liquid chromatography-electrospray ionization tandem mass spectrometry for 20 PTH-AA derivatives, and long-term stability testing of PTH-AAs to ensure quantitative quality in the reaction. The 20 corresponding [13C6]-PTH-AAs were prepared by use of a one-pot reaction involving a mixture of [13C6]-Edman reagent and 20 AAs. Good linearity was observed for standard curves for the PTH-AAs, using the corresponding [13C6]-PTH-AAs as internal standards (1-100 pmol per injection, r 2 = 0.989-1.000). Serum albumin (human), pepsin (porcine stomach mucosa), α-casein (bovine milk), ribonuclease A (bovine), lysozyme (chicken egg white), and insulin (bovine) subjected to Edman degradation were examined as model proteins and peptides for N-terminal AA analysis. The results of the impurity test were satisfactory. Yield from the entire reaction with human serum albumin was estimated to be at least 75 %, indicating great potential for absolute quantification of proteins without protein standards.